From Retrieval to Reasoning: Vector-Based RAG vs GraphRAG


From Retrieval to Reasoning: A Comparative Study of Vector-Based RAG and GraphRAG in Knowledge-Augmented AI Systems

Abstract

Retrieval-Augmented Generation (RAG) has emerged as a foundational architecture for grounding large language models (LLMs) in external knowledge. While traditional RAG systems rely primarily on vector similarity search, recent advances introduce GraphRAG, which incorporates explicit entity relationships through knowledge graphs. This article provides a structured introduction to both approaches, illustrates their operation through concrete examples, compares their strengths and limitations, and examines the distinct problem classes each is best suited to solve.


1. Introduction

Large language models exhibit strong generative capabilities but suffer from limitations related to factual grounding, hallucinations, and knowledge cutoff constraints. Retrieval-Augmented Generation (RAG) addresses these issues by augmenting the model’s prompt with externally retrieved information at inference time.

However, as RAG systems are deployed in increasingly complex domains—such as enterprise finance, legal reasoning, healthcare, and ERP platforms—it has become clear that semantic similarity alone is often insufficient. Many real-world questions require understanding relationships, dependencies, and causal chains across multiple entities. This gap has motivated the development of GraphRAG, an extension of RAG that integrates structured knowledge representations.


2. Traditional (Vector-Based) RAG

2.1 Architecture and Mechanism

A standard RAG pipeline typically consists of:

  1. Document ingestion and chunking
  2. Embedding generation using an embedding model
  3. Vector storage in a vector database
  4. Similarity-based retrieval at query time
  5. Prompt augmentation and generation by an LLM

The core assumption is that semantic similarity correlates with relevance.


2.2 Example

Scenario:
A user asks:

“What is the approval limit for a senior manager?”

A vector RAG system:

  • Retrieves policy document chunks mentioning “senior manager approval”
  • Injects those passages into the prompt
  • Generates an answer based on the retrieved text

This approach works well when:

  • The answer exists in a single document
  • Minimal reasoning across documents is required

2.3 Strengths and Limitations

Strengths

  • Simple to implement
  • Scales efficiently
  • Effective for FAQs, manuals, and static documentation

Limitations

  • Weak at multi-step reasoning
  • No explicit understanding of relationships
  • Context fragmentation across documents

3. GraphRAG

3.1 Architecture and Mechanism

GraphRAG extends the RAG paradigm by introducing a knowledge graph layer. Its typical pipeline includes:

  1. Entity extraction (people, systems, accounts, rules)
  2. Relationship extraction (depends on, reports to, governed by)
  3. Graph construction (nodes and edges)
  4. Hybrid retrieval:
    • Graph traversal for relational context
    • Vector search for semantic grounding
  5. Structured context injection into the LLM

The key assumption shifts from similarity to connectedness and reasoning.


3.2 Example

Scenario:
A user asks:

“Why was this invoice rejected even though it was under the approval limit?”

GraphRAG can:

  • Identify the invoice entity
  • Traverse relationships to:
    • Supplier risk status
    • Cost center rules
    • Exception policies
  • Combine these connected facts to explain the rejection

This level of reasoning cannot be reliably achieved using similarity search alone.


3.3 Strengths and Limitations

Strengths

  • Supports multi-hop reasoning
  • Preserves domain logic
  • Improves explainability and auditability

Limitations

  • Higher implementation complexity
  • Requires schema design and extraction pipelines
  • Greater computational and operational cost

4. Comparative Analysis

DimensionVector RAGGraphRAG
Retrieval methodSemantic similarityGraph traversal + similarity
Knowledge representationUnstructured textStructured entities and relations
Reasoning capabilityLimitedStrong (multi-hop)
Implementation complexityLowHigh
Best suited forSimple lookupComplex decision logic
ExplainabilityModerateHigh

5. Applications and Use-Case Alignment

5.1 Where Vector RAG Excels

  • Customer support bots
  • Technical documentation search
  • Knowledge bases with isolated facts
  • Content summarization

5.2 Where GraphRAG Excels

  • Enterprise finance and ERP systems
  • Compliance and audit analysis
  • Legal and regulatory reasoning
  • Medical decision support
  • Complex workflow automation

In practice, hybrid systems are increasingly common, where vector RAG handles recall while GraphRAG enables structured reasoning.


6. Solving Different Classes of Problems

The distinction between RAG and GraphRAG is not competitive but complementary:

  • Vector RAG solves “What is relevant?”
  • GraphRAG solves “How does it all connect?”

As AI systems evolve from information access toward autonomous decision-making, this distinction becomes critical.


7. Conclusion

Traditional RAG represents a major step forward in grounding language models, but its reliance on semantic similarity limits its reasoning depth. GraphRAG addresses these limitations by introducing explicit structure, enabling LLMs to reason over relationships rather than isolated text fragments.

The future of knowledge-augmented AI systems is not an either-or choice between RAG and GraphRAG, but a layered architecture in which both coexist—retrieval for breadth, graphs for depth, and LLMs for synthesis.